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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946066.1_cds_XP_016488353.1_78994
CDS Infomation

[gene=LOC107808356] [db_xref=GeneID:107808356] [protein=upstream activation factor subunit spp27-like isoform X2] [protein_id=XP_016488353.1] [location=join(4041..4357,5671..5782,5878..6052,6388..6468,6641..6816,7364..7489)] [gbkey=CDS]
Sequence

ATGGTGTCGGATTCCGTATTGGTTGATCGGCTCCGGGAAATTCTCAAAGTTTCCGACCTT
GAAACTACCACCGCCGGCAGCGTTCGTCGGAATCTTGAGGAGGAATTCGGGGTCGACTTA
AATGACAGAAAAGCTTTTATCAGGGACCAAATCGACCTTTTCCTTCGAATCCATGTTGAG
GAAACCCCAAACGACGACGTACAAGAAGTAGAAGAAGAAGAACAAGAAACAGAGAATGTG
AAGGAAGAGGAAAATGATGATTCTTGCTCCCAAGAAGAAGAGAATGAGAGTGACACAGGG
ACAAAGGAGAAATCCCAGTCTGAGAAAATGAATGGAGAAGCAAAGAAAAAAGGGGGCTTT
AACAAGCCATGCGCACTTTCTCCACAGCTTCAGAAATTGGTTGGCGAGTCTGAACTTGGC
AGACCTGAGGTCGTTAAGAAGATTTGGGCTTATATTCGGGAGAAGAATTTACAAAACCCA
CAGAACAAGCGGAAAATTTTATGTGATGAAGTTTTGAGTGAAATTTTTCGGGCCAAAACA
ATCGACATGTTCCAGATGAACAAGGTGCTGTCCAAGCACATTTGGCCCATAGATGAGGAA
GATGGATCTTTTTCTTTGACTCATCCAGCAAGTCAAGTCAAATCCTCTGTGAAGAAAAGG
CTACCGAAACAAGGAAGAGAAGAAGCTTTAGATGAGCCAAAGCAGAAAGAGAAAAGGCAG
AAAAGGGGAGGATCTGGTTTTCTTGCTCCAGTTCGATTATCAGATGCCCTTGTGAAATTC
TTCGGTAATGGTGAAAAGGCATTAACTCGGGCTGATGTTATCAAGCGAATATGGCAATAT
ATAAAAGAAAATGAGCTGCAGGATCCATCGGATAAGAAGACAATCATCTGCGATGAAAGG
TTAAAAGAACTATTTCAAGTTGATTCCTTCCACGGCTTCACAGTTACAAAGCTCTTGACT
GCGCATTTTATCAAAAGAGAAGACTGA

Peptide Sequence

PEP ID

XP_016488353.1
PEP Infomation

PREDICTED: upstream activation factor subunit spp27-like isoform X2 [Nicotiana tabacum]
Sequence

MVSDSVLVDRLREILKVSDLETTTAGSVRRNLEEEFGVDLNDRKAFIRDQIDLFLRIHVE
ETPNDDVQEVEEEEQETENVKEEENDDSCSQEEENESDTGTKEKSQSEKMNGEAKKKGGF
NKPCALSPQLQKLVGESELGRPEVVKKIWAYIREKNLQNPQNKRKILCDEVLSEIFRAKT
IDMFQMNKVLSKHIWPIDEEDGSFSLTHPASQVKSSVKKRLPKQGREEALDEPKQKEKRQ
KRGGSGFLAPVRLSDALVKFFGNGEKALTRADVIKRIWQYIKENELQDPSDKKTIICDER
LKELFQVDSFHGFTVTKLLTAHFIKRED

Transcript Sequence

Gene sequence data has not been registered.